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erikg's avatar

The pangenome / variation graph figure (second one) is from a review paper: "Pangenome Graphs" https://doi.org/10.1146/annurev-genom-120219-080406. It describes the state of the art for pangenome data models as of several years ago. This specific figure shows three different visualizations of different parts of a gene in the human MHC class II. The colored bars show haplotypes assembled from the O.G. human reference genome project. Things have really changed with the new assembly data in the HPRC. We now have pangenome graph models of the entire MHC that include ~90 nearly complete assemblies! (like this http://hypervolu.me/~erik/MHC/mhc89/HPRCy1v2.MHC.fa.07df256.7748b33.fc0aea3.smooth.fix.og.viz_depth_multiqc.png)

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V Allen's avatar

How about the X Men series?

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